openminds.v5.stimulation

In-depth metadata about stimulation protocols in neuroscience experiments.

class StimulationActivity(lookup_label=None, custom_property_sets=None, description=None, end_time=None, inputs=None, is_part_of=None, outputs=None, performed_by=None, preparation_design=None, protocols=None, setup=None, start_time=None, stimuli=None, study_targets=None, id=None, data=None, space=None, release_status=None)

Bases: KGObject, StimulationActivity

<description not available>

Parameters:

• custom_property_sets (CustomPropertySet) – no description available

• description (str) – Longer statement or account giving the characteristics of the stimulation activity.

• end_time (datetime, time) – no description available

• inputs (SubjectGroupState, SubjectState, TissueSampleCollectionState, TissueSampleState) – Something or someone that is put into or participates in a process or machine.

• is_part_of (DatasetVersion) – Reference to the ensemble of multiple things or beings.

• lookup_label (str) – no description available

• outputs (File, FileBundle, SubjectGroupState, SubjectState, TissueSampleCollectionState, TissueSampleState) – Something or someone that comes out of, is delivered or produced by a process or machine.

• performed_by (SoftwareAgent, Person) – no description available

• preparation_design (PreparationType) – no description available

• protocols (Protocol) – Plan that describes the process of a scientific or medical experiment, treatment, or procedure.

• setup (Setup) – no description available

• start_time (datetime, time) – no description available

• stimuli (EphysStimulus) – no description available

• study_targets (AnatomicalCavity, AuditoryStimulusType, BiologicalOrder, BiologicalSex, BreedingType, CellCultureType, CellType, DeviceType, Disease, DiseaseModel, ElectricalStimulusType, ExternalBodyRegion, GeneticStrainType, GustatoryStimulusType, Handedness, MolecularEntity, MuscularStructure, NervousSystemStructure, OlfactoryStimulusType, OpticalStimulusType, Organ, OrganSystemStructure, OrganismSubstance, OrganismSystem, SkeletalStructure, Species, SubcellularEntity, TactileStimulusType, TermSuggestion, TissueSampleType, TissueStructure, VascularStructure, VisualStimulusType, CustomAnatomicalEntity, ParcellationEntity, ParcellationEntityVersion) – Structure or function that was targeted within a study.

class EphysStimulus(lookup_label=None, delivered_by=None, description=None, epoch=None, generated_by=None, internal_identifier=None, is_stimulus_for=None, specifications=None, type=None, id=None, data=None, space=None, release_status=None)

Bases: KGObject, EphysStimulus

<description not available>

Parameters:

• delivered_by (ElectrodeArrayUsage, ElectrodeUsage, PipetteUsage, MRICoilUsage, MRIScannerUsage, SlicingDeviceUsage) – no description available

• description (str) – Longer statement or account giving the characteristics of the ephys stimulus.

• epoch (QuantitativeValue) – no description available

• generated_by (ElectrodeArrayUsage, ElectrodeUsage, PipetteUsage, MRICoilUsage, MRIScannerUsage, SlicingDeviceUsage) – no description available

• internal_identifier (str) – Term or code that identifies the ephys stimulus within a particular product.

• lookup_label (str) – no description available

• specifications (Configuration, File, FileBundle, PropertyValueList) – Detailed and precise presentation of, or proposal for something.

• type (ElectricalStimulusType) – Distinct class to which a group of entities or concepts with similar characteristics or attributes belong to.

• is_stimulus_for (StimulationActivity) – reverse of ‘stimuli’