Index

A

accepted_terms_of_use (KGClient attribute) AccountInformation (class in fairgraph.openminds.core) ActionStatusType (class in fairgraph.openminds.controlled_terms) ActivityLog (class in fairgraph.utility) add_property() (Query method) (QueryProperty method) Affiliation (class in fairgraph.openminds.core) AgeCategory (class in fairgraph.openminds.controlled_terms) AmountOfChemical (class in fairgraph.openminds.chemicals) AnalysisTechnique (class in fairgraph.openminds.controlled_terms)

AnatomicalAxesOrientation (class in fairgraph.openminds.controlled_terms) AnatomicalIdentificationType (class in fairgraph.openminds.controlled_terms) AnatomicalPlane (class in fairgraph.openminds.controlled_terms) AnatomicalTargetPosition (class in fairgraph.openminds.sands) AnnotationCriteriaType (class in fairgraph.openminds.controlled_terms) AnnotationType (class in fairgraph.openminds.controlled_terms) as_list() (in module fairgraph.utility) AtlasAnnotation (class in fairgraph.openminds.sands) AtlasType (class in fairgraph.openminds.controlled_terms) AuditoryStimulusType (class in fairgraph.openminds.controlled_terms)

B

BehavioralProtocol (class in fairgraph.openminds.core) BiologicalOrder (class in fairgraph.openminds.controlled_terms) BiologicalSex (class in fairgraph.openminds.controlled_terms) Book (class in fairgraph.openminds.publications)

BrainAtlas (class in fairgraph.openminds.sands) BrainAtlasVersion (class in fairgraph.openminds.sands) BreedingType (class in fairgraph.openminds.controlled_terms) by_name() (KGObject class method)

C

cache (KGClient attribute) CellCultureType (class in fairgraph.openminds.controlled_terms) CellPatching (class in fairgraph.openminds.ephys) CellType (class in fairgraph.openminds.controlled_terms) Channel (class in fairgraph.openminds.ephys) Chapter (class in fairgraph.openminds.publications) ChemicalMixture (class in fairgraph.openminds.chemicals) ChemicalMixtureType (class in fairgraph.openminds.controlled_terms) ChemicalSubstance (class in fairgraph.openminds.chemicals) children() (KGObject method) Circle (class in fairgraph.openminds.sands) clean_space() (KGClient method) cls (KGProxy property) (LogEntry attribute) Collection (class in fairgraph) Colormap (class in fairgraph.openminds.controlled_terms) Comment (class in fairgraph.openminds.core) CommonCoordinateSpace (class in fairgraph.openminds.sands) compact_uri() (in module fairgraph.utility) Configuration (class in fairgraph.openminds.core)

configure_space() (KGClient method) Consortium (class in fairgraph.openminds.core) ContactInformation (class in fairgraph.openminds.core) ContentType (class in fairgraph.openminds.core) ContentTypePattern (class in fairgraph.openminds.core) Contribution (class in fairgraph.openminds.core) ContributionType (class in fairgraph.openminds.controlled_terms) CoordinatePoint (class in fairgraph.openminds.sands) Copyright (class in fairgraph.openminds.core) count() (KGObject class method) (KGQuery method) CranialWindowConstructionType (class in fairgraph.openminds.controlled_terms) CranialWindowPreparation (class in fairgraph.openminds.specimen_prep) CranialWindowReinforcementType (class in fairgraph.openminds.controlled_terms) create_new_instance() (KGClient method) CriteriaQualityType (class in fairgraph.openminds.controlled_terms) CustomAnatomicalEntity (class in fairgraph.openminds.sands) CustomAnnotation (class in fairgraph.openminds.sands) CustomCoordinateSpace (class in fairgraph.openminds.sands) CustomPropertySet (class in fairgraph.openminds.core)

D

DataAnalysis (class in fairgraph.openminds.computation) Dataset (class in fairgraph.openminds.core) DatasetVersion (class in fairgraph.openminds.core) DataType (class in fairgraph.openminds.controlled_terms) default_space (KGEmbedded property) delete() (KGObject method) (KGProxy method) delete_instance() (KGClient method)

delta (LogEntry attribute) DeviceType (class in fairgraph.openminds.controlled_terms) diff() (KGObject method) DifferenceMeasure (class in fairgraph.openminds.controlled_terms) Disease (class in fairgraph.openminds.controlled_terms) DiseaseModel (class in fairgraph.openminds.controlled_terms) DOI (class in fairgraph.openminds.core) dump() (KGObject method)

E

EducationalLevel (class in fairgraph.openminds.controlled_terms) ElectricalStimulusType (class in fairgraph.openminds.controlled_terms) Electrode (class in fairgraph.openminds.ephys) ElectrodeArray (class in fairgraph.openminds.ephys) ElectrodeArrayUsage (class in fairgraph.openminds.ephys) ElectrodePlacement (class in fairgraph.openminds.ephys) ElectrodeUsage (class in fairgraph.openminds.ephys) Ellipse (class in fairgraph.openminds.sands)

entries (ActivityLog attribute) Environment (class in fairgraph.openminds.computation) EphysStimulus (class in fairgraph.openminds.stimulation) EthicsAssessment (class in fairgraph.openminds.controlled_terms) exists() (KGObject method) expand_uri() (in module fairgraph.utility) ExperimentalApproach (class in fairgraph.openminds.controlled_terms) export() (KGObject method)

F

File (class in fairgraph.openminds.core) FileArchive (class in fairgraph.openminds.core) FileBundle (class in fairgraph.openminds.core) FileBundleGrouping (class in fairgraph.openminds.controlled_terms) FilePathPattern (class in fairgraph.openminds.core) FileRepository (class in fairgraph.openminds.core) FileRepositoryStructure (class in fairgraph.openminds.core) FileRepositoryType (class in fairgraph.openminds.controlled_terms) FileUsageRole (class in fairgraph.openminds.controlled_terms)

Filter (class in fairgraph.queries) from_alias() (KGObject class method) from_id() (KGObject class method) from_jsonld() (KGEmbedded class method) (KGObject class method) (LinkedMetadata class method) from_uri() (KGObject class method) from_uuid() (KGObject class method) Funding (class in fairgraph.openminds.core)

G

generate_minimal_query() (KGObject class method) generate_query() (KGObject class method) generate_query_filter_properties() (KGEmbedded class method) (KGObject class method)

generate_query_properties() (KGEmbedded class method) (KGObject class method) GeneticStrainType (class in fairgraph.openminds.controlled_terms) GRIDID (class in fairgraph.openminds.core) GustatoryStimulusType (class in fairgraph.openminds.controlled_terms)

H

Handedness (class in fairgraph.openminds.controlled_terms) HANDLE (class in fairgraph.openminds.core)

HardwareSystem (class in fairgraph.openminds.computation) Hash (class in fairgraph.openminds.core)

I

id (LogEntry attribute) instance_from_full_uri() (KGClient method) is_released() (KGClient method) (KGObject method) (KGProxy method)

ISBN (class in fairgraph.openminds.core) ISSN (class in fairgraph.openminds.core)

K

KGClient (class in fairgraph) KGEmbedded (class in fairgraph)

KGObject (class in fairgraph) KGProxy (class in fairgraph) KGQuery (class in fairgraph)

L

Language (class in fairgraph.openminds.controlled_terms) Laterality (class in fairgraph.openminds.controlled_terms) LaunchConfiguration (class in fairgraph.openminds.computation) LearningResource (class in fairgraph.openminds.publications) LearningResourceType (class in fairgraph.openminds.controlled_terms) License (class in fairgraph.openminds.core) LinkedMetadata (class in openminds.base) links (LinkedMetadata property) list() (KGClient method) (KGObject class method)

LivePaper (class in fairgraph.openminds.publications) LivePaperResourceItem (class in fairgraph.openminds.publications) LivePaperSection (class in fairgraph.openminds.publications) LivePaperVersion (class in fairgraph.openminds.publications) load() (Collection method) (LinkedMetadata class method) LocalFile (class in fairgraph.openminds.computation) LogEntry (class in fairgraph.utility)

M

MeasuredQuantity (class in fairgraph.openminds.controlled_terms) Measurement (class in fairgraph.openminds.core) MetaDataModel (class in fairgraph.openminds.core) MetaDataModelType (class in fairgraph.openminds.controlled_terms) MetaDataModelVersion (class in fairgraph.openminds.core) Model (class in fairgraph.openminds.core) ModelAbstractionLevel (class in fairgraph.openminds.controlled_terms)

ModelScope (class in fairgraph.openminds.controlled_terms) ModelValidation (class in fairgraph.openminds.computation) ModelVersion (class in fairgraph.openminds.core) modified_data() (KGObject method) MolecularEntity (class in fairgraph.openminds.controlled_terms) move_all_to_space() (KGClient method) move_to_space() (KGClient method)

N

normalize_data() (in module fairgraph.utility) normalize_filter() (KGEmbedded class method) (KGObject class method)

NumericalProperty (class in fairgraph.openminds.core)

O

OlfactoryStimulusType (class in fairgraph.openminds.controlled_terms) OperatingDevice (class in fairgraph.openminds.controlled_terms) OperatingSystem (class in fairgraph.openminds.controlled_terms) OpticalStimulusType (class in fairgraph.openminds.controlled_terms) Optimization (class in fairgraph.openminds.computation)

ORCID (class in fairgraph.openminds.core) Organ (class in fairgraph.openminds.controlled_terms) OrganismSubstance (class in fairgraph.openminds.controlled_terms) OrganismSystem (class in fairgraph.openminds.controlled_terms) Organization (class in fairgraph.openminds.core)

P

ParcellationEntity (class in fairgraph.openminds.sands) ParcellationEntityVersion (class in fairgraph.openminds.sands) ParcellationTerminology (class in fairgraph.openminds.sands) ParcellationTerminologyVersion (class in fairgraph.openminds.sands) PatchClampVariation (class in fairgraph.openminds.controlled_terms) Periodical (class in fairgraph.openminds.publications) Person (class in fairgraph.openminds.core) Pipette (class in fairgraph.openminds.ephys) PipetteUsage (class in fairgraph.openminds.ephys)

PreparationType (class in fairgraph.openminds.controlled_terms) ProductAccessibility (class in fairgraph.openminds.controlled_terms) ProductSource (class in fairgraph.openminds.chemicals) ProgrammingLanguage (class in fairgraph.openminds.controlled_terms) Project (class in fairgraph.openminds.core) PropertyValueList (class in fairgraph.openminds.core) Protocol (class in fairgraph.openminds.core) ProtocolExecution (class in fairgraph.openminds.core) PublicationIssue (class in fairgraph.openminds.publications) PublicationVolume (class in fairgraph.openminds.publications)

Q

QualitativeOverlap (class in fairgraph.openminds.controlled_terms) QualitativeRelationAssessment (class in fairgraph.openminds.sands) QuantitativeRelationAssessment (class in fairgraph.openminds.sands) QuantitativeValue (class in fairgraph.openminds.core)

QuantitativeValueArray (class in fairgraph.openminds.core) QuantitativeValueRange (class in fairgraph.openminds.core) Query (class in fairgraph.queries) query() (KGClient method) QueryProperty (class in fairgraph.queries)

R

Recording (class in fairgraph.openminds.ephys) RecordingActivity (class in fairgraph.openminds.ephys) Rectangle (class in fairgraph.openminds.sands) refresh() (KGClient method) release() (KGClient method) (KGObject method) (KGProxy method) replace_instance() (KGClient method)

ResearchProductGroup (class in fairgraph.openminds.core) resolve() (KGEmbedded method) (KGObject method) (KGProxy method) (KGQuery method) retrieve_query() (KGClient method) RORID (class in fairgraph.openminds.core) RRID (class in fairgraph.openminds.core)

S

save() (KGEmbedded method) (KGObject method) (LinkedMetadata method) ScholarlyArticle (class in fairgraph.openminds.publications) SemanticDataType (class in fairgraph.openminds.controlled_terms) serialize() (Filter method) (Query method) (QueryProperty method) Service (class in fairgraph.openminds.controlled_terms) ServiceLink (class in fairgraph.openminds.core) set_error_handling() (KGEmbedded class method) (KGObject class method) Setup (class in fairgraph.openminds.core) SetupType (class in fairgraph.openminds.controlled_terms) show() (KGObject method) Simulation (class in fairgraph.openminds.computation) SlicingDevice (class in fairgraph.openminds.specimen_prep) SlicingDeviceUsage (class in fairgraph.openminds.specimen_prep) Software (class in fairgraph.openminds.core) SoftwareAgent (class in fairgraph.openminds.computation)

SoftwareApplicationCategory (class in fairgraph.openminds.controlled_terms) SoftwareFeature (class in fairgraph.openminds.controlled_terms) SoftwareVersion (class in fairgraph.openminds.core) space (KGEmbedded property) (LogEntry attribute) space_info() (KGClient method) Species (class in fairgraph.openminds.controlled_terms) StimulationActivity (class in fairgraph.openminds.stimulation) StimulationApproach (class in fairgraph.openminds.controlled_terms) StimulationTechnique (class in fairgraph.openminds.controlled_terms) StockNumber (class in fairgraph.openminds.core) store_query() (KGClient method) Strain (class in fairgraph.openminds.core) StringProperty (class in fairgraph.openminds.core) SubcellularEntity (class in fairgraph.openminds.controlled_terms) Subject (class in fairgraph.openminds.core) SubjectAttribute (class in fairgraph.openminds.controlled_terms) SubjectGroup (class in fairgraph.openminds.core) SubjectGroupState (class in fairgraph.openminds.core) SubjectState (class in fairgraph.openminds.core) SWHID (class in fairgraph.openminds.core)

T

TactileStimulusType (class in fairgraph.openminds.controlled_terms) Technique (class in fairgraph.openminds.controlled_terms) Terminology (class in fairgraph.openminds.controlled_terms) TermSuggestion (class in fairgraph.openminds.controlled_terms) TissueCulturePreparation (class in fairgraph.openminds.specimen_prep) TissueSample (class in fairgraph.openminds.core) TissueSampleAttribute (class in fairgraph.openminds.controlled_terms) TissueSampleCollection (class in fairgraph.openminds.core)

TissueSampleCollectionState (class in fairgraph.openminds.core) TissueSampleSlicing (class in fairgraph.openminds.specimen_prep) TissueSampleState (class in fairgraph.openminds.core) TissueSampleType (class in fairgraph.openminds.controlled_terms) to_jsonld() (LinkedMetadata method) type (KGProxy property) type_ (LogEntry attribute) TypeOfUncertainty (class in fairgraph.openminds.controlled_terms)

U

UBERONParcellation (class in fairgraph.openminds.controlled_terms) UnitOfMeasurement (class in fairgraph.openminds.controlled_terms) unrelease() (KGClient method) (KGObject method) (KGProxy method)

update() (ActivityLog method) update_instance() (KGClient method) uri_from_uuid() (KGClient method) (KGObject class method) user_info() (KGClient method) uuid_from_uri() (KGClient method)

V

validate() (LinkedMetadata method) ValidationTest (class in fairgraph.openminds.computation)

ValidationTestVersion (class in fairgraph.openminds.computation) Visualization (class in fairgraph.openminds.computation) VisualStimulusType (class in fairgraph.openminds.controlled_terms)

W

WebResource (class in fairgraph.openminds.core) WebService (class in fairgraph.openminds.core) WebServiceVersion (class in fairgraph.openminds.core)

WorkflowExecution (class in fairgraph.openminds.computation) WorkflowRecipe (class in fairgraph.openminds.computation) WorkflowRecipeVersion (class in fairgraph.openminds.computation)